Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE48793.1KEGG: ttu:TERTU_2184 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770249. (228 aa)    
Predicted Functional Partners:
AEE48794.1
Hypothetical protein; IMG reference gene:2504770250.
       0.613
AEE48792.1
NAD(P)H dehydrogenase (quinone); COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: mac:MA0147 NADPH:quinone reductase; PFAM: Flavodoxin-like fold; SPTR: NADPH:quinone reductase; IMG reference gene:2504770248; PFAM: Flavodoxin-like fold.
       0.421
AEE48795.1
KEGG: llo:LLO_1362 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770251.
       0.420
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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