Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
AEE48858.1Protein of unknown function DUF819; COGs: COG5505 integral membrane protein; InterPro IPR008537; KEGG: sli:Slin_1701 protein of unknown function DUF819; PFAM: Protein of unknown function DUF819; SPTR: Putative uncharacterized protein; IMG reference gene:2504770317; PFAM: Protein of unknown function (DUF819). (391 aa)    
Predicted Functional Partners:
AEE47936.1
KEGG: sli:Slin_3122 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769372.
  
     0.613
AEE53936.1
COGs: COG4857 kinase; InterPro IPR002575; KEGG: aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SPTR: Methylthioribose kinase; IMG reference gene:2504775516; PFAM: Phosphotransferase enzyme family; TIGRFAM: 5-methylthioribose kinase.
  
     0.557
AEE48859.1
KEGG: fjo:Fjoh_1864 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770318.
       0.550
AEE48857.1
Protein of unknown function DUF2261, transmembrane; COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: dfe:Dfer_2495 hypothetical protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: Putative uncharacterized protein; IMG reference gene:2504770316.
       0.448
AEE48325.1
KEGG: sli:Slin_2828 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769769.
  
     0.420
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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