Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48861.1InterPro IPR002860; KEGG: sti:Sthe_2668 glycosyl hydrolase, BNR repeat-containing protein; PFAM: BNR repeat; SPTR: Glycosyl hydrolase, BNR repeat-containing protein; IMG reference gene:2504770320; PFAM: BNR/Asp-box repeat. (1058 aa)    
Predicted Functional Partners:
AEE48862.1
SNF2-related protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR007527:IPR000330:IPR001650:IPR014001; KEGG: amr:AM1_1164 SNF2 family helicase putative; PFAM: SNF2-related; Zinc finger, SWIM-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Genome sequencing data, contig C316; IMG reference gene:2504770321; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; SWIM zinc finger.
       0.773
AEE52945.1
PepSY-associated TM helix domain protein; InterPro IPR005625; KEGG: ran:Riean_1759 DNA mismatch repair protein; PFAM: PepSY-associated TM helix; SPTR: Putative uncharacterized protein; IMG reference gene:2504774517.
  
     0.638
AEE53855.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_2845 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; IMG reference gene:2504775434; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.590
AEE48860.1
Hypothetical protein; IMG reference gene:2504770319.
       0.584
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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