Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48864.1Transcriptional regulator, XRE family; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: mtt:Ftrac_3771 transcriptional regulator, xre family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative transcriptional regulator; IMG reference gene:2504770323; PFAM: Helix-turn-helix. (68 aa)    
Predicted Functional Partners:
AEE48865.1
KEGG: lby:Lbys_3464 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770324.
       0.533
AEE48863.1
Peptidase S41; InterPro IPR005151; KEGG: ote:Oter_3660 peptidase S41; PFAM: Peptidase S41; SPTR: Putative uncharacterized protein; IMG reference gene:2504770322; PFAM: Peptidase family S41.
       0.511
AEE48866.1
KEGG: chl:Chy400_2648 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770325.
       0.419
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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