STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE48892.1Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: cpi:Cpin_4160 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LuxR family; IMG reference gene:2504770353; PFAM: Response regulator rece [...] (231 aa)    
Predicted Functional Partners:
AEE48891.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cpi:Cpin_4291 histidine kinase; PFAM: ATP-binding region, ATPase-like; SPTR: Histidine kinase; IMG reference gene:2504770352; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   0.929
AEE52089.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594:IPR019734; KEGG: dfe:Dfer_4503 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Tetratricopeptide repeat; SPTR: Histidine kinase; IMG reference gene:2504773630; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.839
AEE53332.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011110:IPR011123:IPR003594; KEGG: cpi:Cpin_3101 histidine kinase; PFAM: ATP-binding region, ATPase-like; Two component regulator three Y; Two component regulator propeller; SPTR: Histidine kinase; IMG reference gene:2504774905; PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller.
 
   0.830
AEE49390.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: sli:Slin_5844 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: Signal transduction histidine kinase; IMG reference gene:2504770858; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   0.829
AEE51749.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: sli:Slin_6528 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: Histidine kinase; IMG reference gene:2504773283; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   0.826
AEE52416.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: cpi:Cpin_4159 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: Histidine kinase; IMG reference gene:2504773969; PFAM: Histidine kinase; 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2.
  
   0.826
AEE49093.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR001440:IPR011712:IPR003594:IPR019734; KEGG: dfe:Dfer_4503 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; Tetratricopeptide TPR-1; SMART: ATP-binding region, ATPase-like; Tetratricopeptide repeat; SPTR: Histidine kinase; IMG reference gene:2504770557; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Tetratricopeptide repeat.
 
   0.825
AEE53672.1
COGs: COG4585 Signal transduction histidine kinase; InterProIPR019734:IPR003594:IPR013105:IPR001440:IPR 011712; KEGG: dfe:Dfer_4503 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: ATP-binding region, ATPase-like; Tetratricopeptide repeat; SPTR: Histidine kinase; IMG reference gene:2504775247; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   0.825
AEE54349.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR019734:IPR003594:IPR001440:IPR011712; KEGG: dfe:Dfer_4503 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; Tetratricopeptide TPR-1; SMART: ATP-binding region, ATPase-like; Tetratricopeptide repeat; SPTR: Histidine kinase; IMG reference gene:2504775942; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   0.825
AEE50418.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011110:IPR011123:IPR011712:IPR003594; KEGG: cpi:Cpin_3101 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; Two component regulator three Y; Two component regulator propeller; SPTR: GGDEF domain protein; IMG reference gene:2504771914; PFAM: Histidine kinase; Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   0.769
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.