Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE48894.1Hypothetical protein; IMG reference gene:2504770355. (166 aa)    
Predicted Functional Partners:
AEE48893.1
Hypothetical protein; IMG reference gene:2504770354.
       0.634
AEE48892.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: cpi:Cpin_4160 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LuxR family; IMG reference gene:2504770353; PFAM: Response regulator rece [...]
       0.621
AEE48891.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cpi:Cpin_4291 histidine kinase; PFAM: ATP-binding region, ATPase-like; SPTR: Histidine kinase; IMG reference gene:2504770352; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.551
AEE48895.1
SPTR: Membrane protein, putative; IMG reference gene:2504770356.
       0.542
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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