STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE48899.1KEGG: sus:Acid_5740 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770360. (454 aa)    
Predicted Functional Partners:
AEE48898.1
KEGG: vex:VEA_000688 lipoprotein; SPTR: Lipoprotein nlpE; IMG reference gene:2504770359; PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance.
       0.752
AEE48900.1
SPTR: Putative uncharacterized protein; IMG reference gene:2504770361.
       0.515
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.