Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE48900.1SPTR: Putative uncharacterized protein; IMG reference gene:2504770361. (229 aa)    
Predicted Functional Partners:
AEE48899.1
KEGG: sus:Acid_5740 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770360.
       0.515
AEE48901.1
KEGG: ran:Riean_1524 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770362.
       0.512
AEE48898.1
KEGG: vex:VEA_000688 lipoprotein; SPTR: Lipoprotein nlpE; IMG reference gene:2504770359; PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance.
       0.502
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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