Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
AEE49166.1Hypothetical protein; IMG reference gene:2504770632. (77 aa)    
Predicted Functional Partners:
AEE49167.1
Hypothetical protein; IMG reference gene:2504770633.
       0.737
AEE49165.1
Protein of unknown function DUF2064; COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: lbf:LBF_2481 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative L-aspartate oxidase; IMG reference gene:2504770631; PFAM: Uncharacterized protein conserved in bacteria (DUF2064).
       0.526
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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