Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE49500.1Hypothetical protein; KEGG: srm:SRM_00929 conserved hypohtetical protein, membrane, containing tetratricopeptide repeat domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504770970. (259 aa)    
Predicted Functional Partners:
AEE49501.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: mtt:Ftrac_3102 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; IMG reference gene:2504770971; PFAM: TonB-dependent Receptor Plug Domain.
 
     0.877
AEE51217.1
KEGG: rlt:Rleg2_4227 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2504772739.
  
     0.603
AEE49606.1
KEGG: cpi:Cpin_5732 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771078.
  
     0.498
AEE47929.1
InterPro IPR011647; KEGG: cki:Calkr_1515 kwg repeat protein; PFAM: KWG Leptospira; SPTR: KWG repeat domain protein; IMG reference gene:2504769364; PFAM: KWG Leptospira.
  
     0.409
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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