Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE49552.1KEGG: rru:Rru_A1375 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771024. (596 aa)    
Predicted Functional Partners:
AEE49553.1
KEGG: rru:Rru_A1375 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771025.
      
0.631
AEE49554.1
Hypothetical protein; IMG reference gene:2504771026.
       0.564
AEE49551.1
KEGG: rru:Rru_A1376 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771023.
      
0.547
AEE49555.1
Hypothetical protein; IMG reference gene:2504771027.
       0.485
AEE49556.1
Hypothetical protein; IMG reference gene:2504771028.
       0.464
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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