STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE49810.1KEGG: scl:sce5771 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771286; PFAM: Uncharacterized protein conserved in bacteria (DUF2236). (280 aa)    
Predicted Functional Partners:
AEE49809.1
Hypothetical protein; IMG reference gene:2504771285.
       0.584
AEE48776.1
KEGG: mxa:MXAN_1566 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770232.
  
     0.520
AEE49811.1
Hypothetical protein; IMG reference gene:2504771287.
       0.480
AEE49812.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: sli:Slin_2778 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; IMG reference gene:2504771288; PFAM: Beta-lactamase.
       0.480
AEE54151.1
InterPro IPR006094; KEGG: sli:Slin_4086 FAD linked oxidase domain protein; PFAM: FAD linked oxidase, N-terminal; SPTR: FAD linked oxidase domain protein; IMG reference gene:2504775740; PFAM: FAD binding domain.
  
     0.422
AEE49763.1
Hypothetical protein; COGs: COG3509 Poly(3-hydroxybutyrate) depolymerase; KEGG: pap:PSPA7_0646 hypothetical protein; SPTR: Polyhydroxybutyrate depolymerase; IMG reference gene:2504771239; PFAM: Phospholipase/Carboxylesterase.
  
     0.402
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.