STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE49851.1KEGG: dfe:Dfer_3063 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771327; PFAM: Protein of unknown function (DUF2029). (398 aa)    
Predicted Functional Partners:
AEE49852.1
COGs: COG3608 deacylase; InterPro IPR007036; KEGG: hoh:Hoch_1798 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase; IMG reference gene:2504771328; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
       0.773
AEE51836.1
KEGG: phe:Phep_2411 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773373; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083.
  
     0.629
AEE51029.1
InterPro IPR013096; KEGG: dfe:Dfer_0119 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein; IMG reference gene:2504772548; PFAM: Cupin domain.
  
     0.456
AEE52044.1
InterPro IPR013096; KEGG: dfe:Dfer_0119 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein; IMG reference gene:2504773585; PFAM: Cupin domain.
  
     0.449
AEE49209.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: chu:CHU_1927 sugar transferase; PFAM: Bacterial sugar transferase; SPTR: Bacterial sugar transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; IMG reference gene:2504770675; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.438
AEE49853.1
Geranylgeranyl reductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR002938:IPR011777; KEGG: cpi:Cpin_0830 geranylgeranyl reductase; PFAM: Monooxygenase, FAD-binding; SPTR: Geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; IMG reference gene:2504771329; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family.
       0.410
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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