STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE49856.1GSCFA domain protein; InterPro IPR014982; KEGG: bfs:BF0817 hypothetical protein; PFAM: GSCFA; SPTR: Putative uncharacterized protein; IMG reference gene:2504771332; PFAM: GSCFA family. (329 aa)    
Predicted Functional Partners:
AEE49855.1
KEGG: cts:Ctha_1971 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771331; PFAM: Secretory lipase.
       0.773
AEE48835.1
Protein of unknown function, membrane YfhO; InterPro IPR018580; KEGG: cat:CA2559_08841 hypothetical protein; PFAM: Protein of unknown function, membrane YfhO; SPTR: Putative uncharacterized protein; IMG reference gene:2504770294; PFAM: Bacterial membrane protein YfhO.
 
     0.553
AEE49857.1
KEGG: sua:Saut_0724 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771333.
       0.544
AEE49881.1
GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: cpi:Cpin_0869 GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter; IMG reference gene:2504771362; PFAM: GH3 auxin-responsive promoter.
  
     0.501
AEE49854.1
KEGG: ehi:EHI_049670 hypothetical protein; SPTR: Bacterioferritin comigratory protein; IMG reference gene:2504771330.
       0.488
AEE51437.1
COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: zpr:ZPR_0488 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Uroporphyrinogen-III synthase; IMG reference gene:2504772964; PFAM: Uroporphyrinogen-III synthase HemD.
  
     0.482
AEE49883.1
KEGG: fba:FIC_00688 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771364; PFAM: Protein of unknown function (DUF3109).
 
     0.472
AEE49594.1
GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: mtt:Ftrac_2873 gh3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: Auxin-regulated protein; IMG reference gene:2504771066; PFAM: GH3 auxin-responsive promoter.
  
     0.461
AEE50505.1
COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205; KEGG: chu:CHU_1639 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA topoisomerase 4 subunit A; IMG reference gene:2504772007; PFAM: DNA gyrase/topoisomerase IV, subunit A.
  
    0.461
AEE51809.1
KEGG: cpi:Cpin_0535 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773346.
  
     0.460
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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