STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE49863.1KEGG: mva:Mvan_5913 putative outer membrane adhesin like proteiin; SPTR: Putative outer membrane adhesin like proteiin; IMG reference gene:2504771339; PFAM: Pectate lyase. (583 aa)    
Predicted Functional Partners:
AEE52229.1
Polygalacturonase; COGs: COG5434 Endopygalactorunase; InterPro IPR001087:IPR000743:IPR006626; KEGG: lby:Lbys_1641 glycoside hydrolase family 28; PFAM: Glycoside hydrolase, family 28; Lipase, GDSL; PRIAM: Polygalacturonase; SPTR: Glycoside hydrolase family 28; IMG reference gene:2504773772; PFAM: Glycosyl hydrolases family 28; GDSL-like Lipase/Acylhydrolase.
 
  
 0.718
AEE49864.1
KEGG: fbc:FB2170_10166 tRNA modification GTPase; SPTR: tRNA modification GTPase; IMG reference gene:2504771340.
       0.714
AEE52223.1
Xylan 1,4-beta-xylosidase; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: cpi:Cpin_5511 glycoside hydrolase family 43; PFAM: Glycoside hydrolase, family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Glycoside hydrolase family 43; IMG reference gene:2504773766; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.692
AEE52239.1
Glycosyl hydrolase family 88; COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: dfe:Dfer_2841 glycosyl hydrolase family 88; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase family 88; IMG reference gene:2504773782; PFAM: Glycosyl Hydrolase Family 88.
 
   
 0.614
AEE49865.1
COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: cpi:Cpin_4448 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; PRIAM: NADPH:quinone reductase; SPTR: Putative oxidoreductase; IMG reference gene:2504771341; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
 
     0.604
AEE52240.1
Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: ote:Oter_4090 pectinesterase; PFAM: Pectinesterase, catalytic; SPTR: Pectinesterase; IMG reference gene:2504773783; PFAM: Pectinesterase.
 
  
 0.550
AEE49862.1
KEGG: fbc:FB2170_02290 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771338; PFAM: Putative esterase.
       0.543
AEE52221.1
InterPro IPR012944; KEGG: phe:Phep_0771 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504773764; PFAM: SusD family.
  
    0.496
AEE49860.1
Oxidoreductase alpha (molybdopterin) subunit; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR010046; KEGG: cpi:Cpin_4072 oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Oxidoreductase alpha (Molybdopterin) subunit; TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; IMG reference gene:2504771336; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) [...]
       0.471
AEE49861.1
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.471
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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