STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE49864.1KEGG: fbc:FB2170_10166 tRNA modification GTPase; SPTR: tRNA modification GTPase; IMG reference gene:2504771340. (388 aa)    
Predicted Functional Partners:
AEE49863.1
KEGG: mva:Mvan_5913 putative outer membrane adhesin like proteiin; SPTR: Putative outer membrane adhesin like proteiin; IMG reference gene:2504771339; PFAM: Pectate lyase.
       0.714
AEE49865.1
COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: cpi:Cpin_4448 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; PRIAM: NADPH:quinone reductase; SPTR: Putative oxidoreductase; IMG reference gene:2504771341; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
       0.594
AEE51938.1
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fjo:Fjoh_3997 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SPTR: Putative transcriptional regulator, Crp/Fnr family; IMG reference gene:2504773476; PFAM: Cyclic nucleotide-binding domain.
  
     0.513
AEE49862.1
KEGG: fbc:FB2170_02290 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771338; PFAM: Putative esterase.
       0.505
AEE49860.1
Oxidoreductase alpha (molybdopterin) subunit; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR010046; KEGG: cpi:Cpin_4072 oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Oxidoreductase alpha (Molybdopterin) subunit; TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; IMG reference gene:2504771336; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) [...]
       0.440
AEE49861.1
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.440
AEE48495.1
KEGG: bcl:ABC1198 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769942; PFAM: Protein of unknown function (DUF1569).
  
     0.410
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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