STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-2PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (138 aa)    
Predicted Functional Partners:
AEE49867.1
Hypothetical protein; IMG reference gene:2504771343.
       0.773
AEE48642.1
COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: dfe:Dfer_4420 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein; IMG reference gene:2504770092; PFAM: PIN domain.
  
     0.682
vapC-3
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.682
vapC-4
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.678
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.534
AEE50347.1
Hypothetical protein; COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: mar:MAE_04270 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771843; PFAM: Domain of unknown function (DUF3368).
  
     0.467
AEE53534.1
COGs: COG5573 nucleic-acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: mar:MAE_07520 hypothetical protein; PFAM: PilT protein, N-terminal; SPTR: Putative uncharacterized protein; IMG reference gene:2504775109; PFAM: PIN domain.
  
     0.457
AEE49779.1
Protein of unknown function DUF2191; InterPro IPR019239; KEGG: maq:Maqu_2253 hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: Putative uncharacterized protein; IMG reference gene:2504771255; PFAM: Uncharacterized protein conserved in bacteria (DUF2191).
 
   0.438
AEE51951.1
Protein of unknown function DUF497; COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: cyt:cce_4948 hypothetical protein; PFAM: Protein of unknown function DUF497; SPTR: Putative uncharacterized protein; IMG reference gene:2504773491; PFAM: Protein of unknown function (DUF497).
  
     0.437
AEE49868.1
KEGG: lwe:lwe2314 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771344.
       0.435
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.