Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE49874.1Amino acid/peptide transporter; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109:IPR005279; KEGG: pbr:PB2503_08949 di-tripeptide ABC transporter-like protein; PFAM: Oligopeptide transporter; SPTR: Amino acid/peptide transporter subfamily protein; TIGRFAM: Amino acid/peptide transporter; IMG reference gene:2504771355; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial. (528 aa)    
Predicted Functional Partners:
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
       0.768
AEE51108.1
Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: sli:Slin_6549 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase M28; IMG reference gene:2504772628; PFAM: PA domain; Peptidase family M28.
 
 
   0.435
AEE48606.1
COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: cpi:Cpin_1651 amino acid permease-associated region; PFAM: Amino acid permease-associated region; SPTR: Amino acid permease-associated region; IMG reference gene:2504770056; PFAM: Amino acid permease.
  
 
 
 0.407
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.