STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE49883.1KEGG: fba:FIC_00688 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771364; PFAM: Protein of unknown function (DUF3109). (191 aa)    
Predicted Functional Partners:
AEE48076.1
KEGG: phe:Phep_2575 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769515; PFAM: Protein of unknown function (DUF2795).
  
     0.772
AEE52129.1
KEGG: sli:Slin_1298 hypothetical protein; SPTR: Putative outer membrane protein; IMG reference gene:2504773671.
 
     0.761
AEE48713.1
KEGG: fbc:FB2170_09621 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770166.
  
     0.754
AEE51437.1
COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: zpr:ZPR_0488 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Uroporphyrinogen-III synthase; IMG reference gene:2504772964; PFAM: Uroporphyrinogen-III synthase HemD.
 
     0.754
rpsU
HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: coc:Coch_0829 30S ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; IMG reference gene:2504771891; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
 
   0.731
AEE50101.1
InterPro IPR005632; KEGG: cpi:Cpin_1054 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH); IMG reference gene:2504771586; PFAM: Outer membrane protein (OmpH-like).
  
     0.727
AEE52321.1
InterPro IPR003772; KEGG: phe:Phep_3814 protein of unknown function DUF177; PFAM: Protein of unknown function DUF177; SPTR: Putative uncharacterized protein; IMG reference gene:2504773867; PFAM: Uncharacterized ACR, COG1399.
 
     0.725
AEE48979.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: fba:FIC_02065 surface antigen (D15); PFAM: Bacterial surface antigen (D15); SPTR: Surface antigen (D15); IMG reference gene:2504770442; PFAM: Surface antigen.
  
     0.724
AEE52016.1
KEGG: phe:Phep_0010 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773556.
  
     0.714
AEE50499.1
KEGG: ran:Riean_1147 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772001.
 
     0.713
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.