STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE49888.1COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: cpi:Cpin_6919 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2; IMG reference gene:2504771369; PFAM: Glycosyl transferase family 2. (373 aa)    
Predicted Functional Partners:
AEE49889.1
InterPro IPR002123; KEGG: ppn:Palpr_0119 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; IMG reference gene:2504771370; PFAM: Acyltransferase.
  
  
 0.795
AEE49887.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: chu:CHU_1195 RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504771368; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.784
AEE50613.1
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: dfe:Dfer_5477 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; IMG reference gene:2504772116; PFAM: Polysaccharide deacetylase.
 
  
 0.733
AEE49913.1
Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
  
     0.692
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
       0.690
AEE49968.1
KEGG: ppn:Palpr_1848 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771450; PFAM: Uncharacterised protein family (UPF0104).
 
     0.670
AEE51381.1
KEGG: chu:CHU_0507 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772907.
  
     0.638
AEE53566.1
COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: cpi:Cpin_6507 O-methyltransferase-like protein; PFAM: O-methyltransferase, family 3; SPTR: O-methyltransferase-like protein; IMG reference gene:2504775141; PFAM: O-methyltransferase.
 
     0.620
AEE50460.1
KEGG: fps:FP0366 glycosyl transferase; SPTR: Probable glycosyl transferase; IMG reference gene:2504771961; PFAM: Glycosyltransferase family 28 C-terminal domain.
 
   
 0.598
AEE50960.1
KEGG: cpi:Cpin_2225 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772477.
 
     0.526
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.