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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE49894.1Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR011418; KEGG: dfe:Dfer_5055 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; SPTR: IolE protein; IMG reference gene:2504771375; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel. (350 aa)    
Predicted Functional Partners:
AEE51335.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: sli:Slin_3436 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein; IMG reference gene:2504772861; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.822
AEE53848.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: sli:Slin_3435 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein; IMG reference gene:2504775427; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
    0.666
AEE53818.1
Glucose-methanol-choline oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: fbc:FB2170_10304 oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family; IMG reference gene:2504775396; PFAM: GMC oxidoreductase.
 
     0.522
AEE49891.1
KEGG: cyn:Cyan7425_2749 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771372.
       0.507
AEE49892.1
HNH endonuclease; InterPro IPR003615:IPR002711; KEGG: cyh:Cyan8802_4619 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease; IMG reference gene:2504771373; PFAM: HNH endonuclease.
       0.507
AEE49893.1
COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: rmr:Rmar_0899 peptidase M1 membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Peptidase M1 membrane alanine aminopeptidase; IMG reference gene:2504771374; PFAM: Peptidase family M1.
       0.507
AEE54337.1
FAD dependent oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: cpi:Cpin_5415 choline dehydrogenase; PFAM: FAD dependent oxidoreductase; Glucose-methanol-choline oxidoreductase, N-terminal; SPTR: Choline dehydrogenase; IMG reference gene:2504775930; PFAM: GMC oxidoreductase.
 
     0.507
AEE50968.1
Glucose-methanol-choline oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: sli:Slin_4690 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase; IMG reference gene:2504772486; PFAM: GMC oxidoreductase.
 
     0.498
AEE49327.1
InterPro IPR010496; KEGG: dfe:Dfer_3234 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; IMG reference gene:2504770794; PFAM: Domain of Unknown Function (DUF1080).
 
     0.478
AEE53819.1
Hypothetical protein; InterPro IPR006311; KEGG: fbc:FB2170_10299 hypothetical protein; SPTR: Putative acetate--CoA ligase; IMG reference gene:2504775397.
 
     0.471
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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