close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE49905.1COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: mtt:Ftrac_3079 flavin reductase domain protein fmn-binding protein; PFAM: Flavin reductase-like, FMN-binding; SPTR: Flavin reductase domain protein FMN-binding protein; IMG reference gene:2504771386; PFAM: Flavin reductase like domain. (291 aa)    
Predicted Functional Partners:
AEE49903.1
COGs: COG3508 Homogentisate 1 2-dioxygenase; InterPro IPR005708; KEGG: lby:Lbys_3502 homogentisate 12-dioxygenase; PFAM: Homogentisate 1,2-dioxygenase; SPTR: Homogentisate 12-dioxygenase; IMG reference gene:2504771384; PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase.
 
   
 0.729
AEE49906.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: bfo:BRAFLDRAFT_118764 hypothetical protein; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2504771387; PFAM: short chain dehydrogenase.
       0.661
AEE49904.1
Fumarylacetoacetase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR015377:IPR002529:IPR005959; KEGG: cti:RALTA_B1480 fumarylacetoacetase (fumarylacetoacetate hydrolase); PFAM: Fumarylacetoacetase, N-terminal; Fumarylacetoacetase, C-terminal-like; PRIAM: Fumarylacetoacetase; SPTR: Fumarylacetoacetase; TIGRFAM: Fumarylacetoacetase; IMG reference gene:2504771385; PFAM: Domain of unknown function (DUF1969); Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: fumarylacetoacetase.
 
  
 0.644
AEE48201.1
Purine or other phosphorylase family 1; COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: cpi:Cpin_4693 purine or other phosphorylase family 1; PFAM: Nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase II; IMG reference gene:2504769644; PFAM: Phosphorylase superfamily.
  
     0.451
AEE54073.1
Luciferase family oxidoreductase, group 1; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949:IPR016048; KEGG: lby:Lbys_1786 luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; SPTR: Luciferase family oxidoreductase, group 1; TIGRFAM: Luciferase family oxidoreductase, group 1; IMG reference gene:2504775660; PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1.
 
  
 0.429
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.