Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE49918.1Hypothetical protein; IMG reference gene:2504771400. (98 aa)    
Predicted Functional Partners:
AEE49919.1
O-antigen polymerase; InterPro IPR007016; KEGG: chu:CHU_0602 lipid A core--O-antigen ligase; PFAM: O-antigen ligase-related; SPTR: Lipid A core--O-antigen ligase; IMG reference gene:2504771401; PFAM: O-Antigen ligase.
       0.545
AEE49917.1
SPTR: Cohesin domain protein; IMG reference gene:2504771399.
       0.486
AEE49914.1
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; COGs: COG1876 D-alanyl-D-alanine carboxypeptidase; InterPro IPR003709; KEGG: tet:TTHERM_00219440 D-alanyl-D-alanine carboxypeptidase family protein; PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; SPTR: D-alanyl-D-alanine carboxypeptidase; IMG reference gene:2504771396; PFAM: D-alanyl-D-alanine carboxypeptidase.
       0.477
AEE49915.1
KEGG: sli:Slin_5879 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771397.
       0.477
AEE49916.1
SPTR: CHU large protein; uncharacterized; IMG reference gene:2504771398.
       0.477
AEE49913.1
Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
       0.465
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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