Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE49994.1Hypothetical protein; IMG reference gene:2504771476. (284 aa)    
Predicted Functional Partners:
AEE49993.1
Hypothetical protein; IMG reference gene:2504771475.
      
0.639
AEE49995.1
Conserved repeat domain protein; InterPro IPR003367:IPR001434; KEGG: thrombospondin type 3 repeat-containing protein; SPTR: Putative cell surface SD repeat protein; TIGRFAM: Protein of unknown function DUF11; IMG reference gene:2504771477.
       0.522
AEE49992.1
Hypothetical protein; InterPro IPR003367; KEGG: kpn:KPN_00994 SD repeat-containing cell surface protein precursor; SPTR: Putative cell surface SD repeat protein; IMG reference gene:2504771474.
       0.400
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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