| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEE50011.1 | AEE50012.1 | Halhy_2126 | Halhy_2127 | Hypothetical protein; IMG reference gene:2504771493. | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | 0.773 |
| AEE50012.1 | AEE50011.1 | Halhy_2127 | Halhy_2126 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | Hypothetical protein; IMG reference gene:2504771493. | 0.773 |
| AEE50012.1 | lepA | Halhy_2127 | Halhy_1598 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.533 |
| AEE50012.1 | obg | Halhy_2127 | Halhy_2958 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.644 |
| AEE50012.1 | prfA | Halhy_2127 | Halhy_1990 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.513 |
| AEE50012.1 | rplC | Halhy_2127 | Halhy_4742 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.584 |
| AEE50012.1 | rplL | Halhy_2127 | Halhy_4573 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.525 |
| AEE50012.1 | rplM | Halhy_2127 | Halhy_2728 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.560 |
| AEE50012.1 | rplQ | Halhy_2127 | Halhy_4769 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | COGs: COG0203 Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; InterPro IPR000456; KEGG: fba:FIC_01994 LSU ribosomal protein L17p; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; IMG reference gene:2504774161; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | 0.510 |
| AEE50012.1 | rplU | Halhy_2127 | Halhy_1511 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.602 |
| AEE50012.1 | rsfS | Halhy_2127 | Halhy_3581 | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.531 |
| lepA | AEE50012.1 | Halhy_1598 | Halhy_2127 | GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | 0.533 |
| lepA | obg | Halhy_1598 | Halhy_2958 | GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.744 |
| lepA | prfA | Halhy_1598 | Halhy_1990 | GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.862 |
| lepA | rplC | Halhy_1598 | Halhy_4742 | GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.920 |
| lepA | rplL | Halhy_1598 | Halhy_4573 | GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.528 |
| lepA | rplM | Halhy_1598 | Halhy_2728 | GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.958 |
| lepA | rplQ | Halhy_1598 | Halhy_4769 | GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | COGs: COG0203 Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; InterPro IPR000456; KEGG: fba:FIC_01994 LSU ribosomal protein L17p; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; IMG reference gene:2504774161; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | 0.911 |
| lepA | rplU | Halhy_1598 | Halhy_1511 | GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.895 |
| obg | AEE50012.1 | Halhy_2958 | Halhy_2127 | GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: bth:BT_3772 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase D; IMG reference gene:2504771494; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family. | 0.644 |