STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE50014.1COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: cpi:Cpin_3674 amino acid permease-associated region; PFAM: Amino acid permease-associated region; SPTR: Amino acid permease-associated region; IMG reference gene:2504771496; PFAM: Amino acid permease. (554 aa)    
Predicted Functional Partners:
AEE50015.1
Hypothetical protein; IMG reference gene:2504771497.
       0.535
AEE50013.1
S23 ribosomal protein; InterPro IPR008815; KEGG: fps:FP1126 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771495; PFAM: S23 ribosomal protein.
  
    0.433
AEE50196.1
COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: aba:Acid345_2088 sodium--dicarboxylate symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: Sodium:dicarboxylate symporter; IMG reference gene:2504771686; PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
 
 0.422
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.