Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50022.1InterPro IPR006619:IPR002502; KEGG: mtt:Ftrac_1437 N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: Peptidoglycan recognition protein, metazoa/bacteria; N-acetylmuramoyl-L-alanine amidase, family 2; SPTR: N-acetylmuramoyl-L-alanine amidase family 2; IMG reference gene:2504771504; PFAM: N-acetylmuramoyl-L-alanine amidase. (461 aa)    
Predicted Functional Partners:
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.773
AEE50023.1
TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR013099:IPR003148; KEGG: fbc:FB2170_16251 potassium channel; PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; SPTR: Potassium uptake protein, TrkA family; IMG reference gene:2504771505; PFAM: Ion channel; TrkA-N domain; TrkA-C domain.
       0.651
AEE50024.1
COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: sli:Slin_0014 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase family; IMG reference gene:2504771506; PFAM: Amidohydrolase.
       0.456
AEE49024.1
InterPro IPR000033; KEGG: dre:557734 very low-density lipoprotein receptor-like; SMART: Low-density lipoprotein receptor, YWTD repeat; SPTR: Low density lipoprotein-receptor; IMG reference gene:2504770487.
  
 
   0.405
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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