STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE50024.1COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: sli:Slin_0014 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase family; IMG reference gene:2504771506; PFAM: Amidohydrolase. (363 aa)    
Predicted Functional Partners:
AEE50023.1
TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR013099:IPR003148; KEGG: fbc:FB2170_16251 potassium channel; PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; SPTR: Potassium uptake protein, TrkA family; IMG reference gene:2504771505; PFAM: Ion channel; TrkA-N domain; TrkA-C domain.
  
    0.540
AEE50116.1
Dienelactone hydrolase-like protein; COGs: COG4188 dienelactone hydrolase; KEGG: sli:Slin_3493 dienelactone hydrolase-like protein; SPTR: Dienelactone hydrolase-like protein; IMG reference gene:2504771602; PFAM: isoform II.
  
     0.521
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.456
AEE50022.1
InterPro IPR006619:IPR002502; KEGG: mtt:Ftrac_1437 N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: Peptidoglycan recognition protein, metazoa/bacteria; N-acetylmuramoyl-L-alanine amidase, family 2; SPTR: N-acetylmuramoyl-L-alanine amidase family 2; IMG reference gene:2504771504; PFAM: N-acetylmuramoyl-L-alanine amidase.
       0.456
AEE54211.1
InterPro IPR010496; KEGG: dfe:Dfer_1206 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; IMG reference gene:2504775800; PFAM: Domain of Unknown Function (DUF1080).
  
     0.435
AEE49522.1
KEGG: hau:Haur_2782 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770993.
  
     0.412
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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