Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50029.1TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: sli:Slin_4238 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2504771511; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family. (1079 aa)    
Predicted Functional Partners:
AEE50030.1
KEGG: lby:Lbys_1875 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771512.
 
 
   0.943
AEE52636.1
InterPro IPR012944; KEGG: cpi:Cpin_0455 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774196; PFAM: SusD family.
  
 
   0.729
AEE52499.1
InterPro IPR012944; KEGG: dfe:Dfer_1619 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504774056; PFAM: SusD family.
  
 
   0.630
AEE52403.1
InterPro IPR012944; KEGG: sli:Slin_4207 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504773951; PFAM: SusD family.
  
 
   0.618
AEE52400.1
KEGG: fbc:FB2170_02550 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773948.
 
 
   0.588
AEE52398.1
KEGG: lby:Lbys_3356 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773945.
 
 
   0.564
AEE48630.1
KEGG: sli:Slin_4811 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770080.
 
 
   0.555
AEE50187.1
KEGG: mtt:Ftrac_2315 TonB family protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding; IMG reference gene:2504771677; PFAM: Gram-negative bacterial tonB protein.
  
 
   0.551
AEE50031.1
KEGG: fbc:FB2170_02555 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771513.
       0.510
AEE53661.1
InterPro IPR012944; KEGG: sli:Slin_4041 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504775236; PFAM: SusD family.
  
 
   0.493
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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