Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50039.1KEGG: dfe:Dfer_0229 Tat pathway signal sequence domain-containing protein; SPTR: Tat pathway signal sequence domain-containing protein; IMG reference gene:2504771522. (215 aa)    
Predicted Functional Partners:
AEE50040.1
Gluconate 2-dehydrogenase (acceptor); COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953; KEGG: sli:Slin_1371 glucose-methanol-choline oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; PRIAM: Gluconate 2-dehydrogenase (acceptor); SPTR: Glucose-methanol-choline oxidoreductase; IMG reference gene:2504771523; PFAM: GMC oxidoreductase.
 
     0.892
AEE53958.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: fbc:FB2170_04990 putative glyoxylate-induced protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable glyoxylate-induced protein; IMG reference gene:2504775538; PFAM: Xylose isomerase-like TIM barrel.
  
     0.623
AEE49074.1
KEGG: lby:Lbys_3312 TwiN-arginine translocation pathway signal; SPTR: Twin-arginine translocation pathway signal; IMG reference gene:2504770537.
  
     0.555
AEE50965.1
Hypothetical protein; InterPro IPR006311; KEGG: sli:Slin_1890 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772483.
  
     0.549
AEE49287.1
InterPro IPR010496; KEGG: sli:Slin_5725 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; IMG reference gene:2504770753; PFAM: Domain of Unknown Function (DUF1080).
  
     0.538
AEE52773.1
Hypothetical protein; InterPro IPR006311; KEGG: sli:Slin_1890 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774340.
  
     0.506
AEE48970.1
KEGG: sli:Slin_1890 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504770432.
  
     0.504
AEE49327.1
InterPro IPR010496; KEGG: dfe:Dfer_3234 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; IMG reference gene:2504770794; PFAM: Domain of Unknown Function (DUF1080).
 
     0.490
AEE52772.1
FAD dependent oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: dfe:Dfer_4714 glucose-methanol-choline oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase; IMG reference gene:2504774339; PFAM: GMC oxidoreductase.
 
     0.487
AEE50406.1
FAD dependent oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: sli:Slin_0454 glucose-methanol-choline oxidoreductase; PFAM: FAD dependent oxidoreductase; Glucose-methanol-choline oxidoreductase, N-terminal; SPTR: Glucose-methanol-choline oxidoreductase; IMG reference gene:2504771902; PFAM: GMC oxidoreductase.
 
     0.470
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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