Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50048.1Protein of unknown function DUF2141; COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: cli:Clim_1087 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: Putative uncharacterized protein; IMG reference gene:2504771531; PFAM: Uncharacterized protein conserved in bacteria (DUF2141). (142 aa)    
Predicted Functional Partners:
AEE50049.1
Putative signal transduction histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: dfe:Dfer_5311 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS; IMG reference gene:2504771532; PFAM: Histidine kinase.
       0.598
AEE50047.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: cpi:Cpin_6204 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; IMG reference gene:2504771530; PFAM: Penicillinase repressor.
       0.517
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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