STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE50053.1InterPro IPR002559; KEGG: npu:Npun_BR171 transposase, IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; IMG reference gene:2504771537; PFAM: Transposase DDE domain. (279 aa)    
Predicted Functional Partners:
AEE50054.1
Peptidase M56 BlaR1; InterPro IPR008756; KEGG: sli:Slin_3430 peptidase M56 BlaR1; PFAM: Peptidase M56, BlaR1; SPTR: Peptidase M56 BlaR1; IMG reference gene:2504771538; PFAM: BlaR1 peptidase M56.
       0.505
AEE50055.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fjo:Fjoh_1362 CopY family transcriptional regulator; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; IMG reference gene:2504771539; PFAM: Penicillinase repressor.
       0.505
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.