Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50056.1COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fjo:Fjoh_1179 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; IMG reference gene:2504771540; PFAM: Beta-lactamase. (439 aa)    
Predicted Functional Partners:
AEE50054.1
Peptidase M56 BlaR1; InterPro IPR008756; KEGG: sli:Slin_3430 peptidase M56 BlaR1; PFAM: Peptidase M56, BlaR1; SPTR: Peptidase M56 BlaR1; IMG reference gene:2504771538; PFAM: BlaR1 peptidase M56.
       0.497
AEE50055.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fjo:Fjoh_1362 CopY family transcriptional regulator; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; IMG reference gene:2504771539; PFAM: Penicillinase repressor.
       0.497
AEE51139.1
KEGG: chu:CHU_1318 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772660; PFAM: Protein of unknown function (DUF3089).
  
     0.476
AEE49783.1
InterPro IPR007029; KEGG: sli:Slin_2511 YHS domain protein; PFAM: YHS; SPTR: Tat pathway signal sequence domain protein; IMG reference gene:2504771259; PFAM: YHS domain.
  
     0.429
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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