Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE50058.1ErfK/YbiS/YcfS/YnhG family protein; COGs: COG3034 conserved hypothetical protein; InterPro IPR005490; KEGG: cpi:Cpin_5418 ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; SPTR: ErfK/YbiS/YcfS/YnhG family protein; IMG reference gene:2504771542; PFAM: L,D-transpeptidase catalytic domain. (251 aa)    
Predicted Functional Partners:
AEE50057.1
Hypothetical protein; IMG reference gene:2504771541.
       0.541
AEE50059.1
COGs: COG1262 conserved hypothetical protein; KEGG: ami:Amir_0185 transcriptional regulator, XRE family; SPTR: Putative uncharacterized protein; IMG reference gene:2504771543; PFAM: Formylglycine-generating sulfatase enzyme.
       0.528
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.