Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
AEE50070.1InterPro IPR005149; KEGG: sli:Slin_0949 transcriptional regulator, PadR-like family; PFAM: Transcriptional regulator PadR N-terminal-like; SPTR: Transcriptional regulator, PadR-like family; IMG reference gene:2504771554; PFAM: Transcriptional regulator PadR-like family. (114 aa)    
Predicted Functional Partners:
AEE50071.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sli:Slin_0946 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2504771555; PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease.
       0.773
AEE51029.1
InterPro IPR013096; KEGG: dfe:Dfer_0119 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein; IMG reference gene:2504772548; PFAM: Cupin domain.
  
    0.591
AEE52044.1
InterPro IPR013096; KEGG: dfe:Dfer_0119 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein; IMG reference gene:2504773585; PFAM: Cupin domain.
  
    0.544
AEE49619.1
KEGG: sli:Slin_0698 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771091.
  
     0.458
AEE50069.1
SPTR: Putative uncharacterized protein; IMG reference gene:2504771553.
       0.455
AEE51690.1
KEGG: sli:Slin_5175 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773222.
  
     0.449
AEE48018.1
KEGG: dfe:Dfer_2270 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769455.
  
     0.446
AEE50061.1
KEGG: ana:all8023 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771545.
 
     0.413
AEE51531.1
KEGG: sli:Slin_3341 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504773060.
 
     0.405
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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