Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE50121.1COGs: COG5587 conserved hypothetical protein; InterPro IPR012808; KEGG: cpi:Cpin_0539 hypothetical protein; PFAM: Conserved hypothetical protein CHP02453; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02453; IMG reference gene:2504771607; PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein. (237 aa)    
Predicted Functional Partners:
AEE50120.1
Hypothetical protein; IMG reference gene:2504771606.
       0.682
AEE50122.1
Glycosyl hydrolase BNR repeat-containing protein; InterPro IPR002860; KEGG: aca:ACP_1356 BNR/Asp-box repeat protein; PFAM: BNR repeat; SPTR: BNR/Asp-box repeat protein; IMG reference gene:2504771608; PFAM: BNR/Asp-box repeat.
       0.555
AEE50101.1
InterPro IPR005632; KEGG: cpi:Cpin_1054 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH); IMG reference gene:2504771586; PFAM: Outer membrane protein (OmpH-like).
  
     0.403
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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