STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE50155.1Glucarate dehydratase; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: sli:Slin_1068 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; PRIAM: Glucarate dehydratase; SPTR: Mandelate racemase/muconate lactonizing protein; IMG reference gene:2504771644; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain. (434 aa)    
Predicted Functional Partners:
AEE50089.1
Galactonate dehydratase; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: rlg:Rleg_4981 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; PRIAM: Galactonate dehydratase; SPTR: Possible galactonate dehydratase; IMG reference gene:2504771574; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain.
  
  
 
0.925
AEE51635.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: cpi:Cpin_3681 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; PRIAM: L-aminoadipate-semialdehyde dehydrogenase; SPTR: Piperideine-6-carboxylate dehydrogenase; IMG reference gene:2504773167; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
     
 0.901
AEE52309.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: sli:Slin_1742 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde Dehydrogenase; IMG reference gene:2504773855; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
     
 0.901
AEE50158.1
COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: sli:Slin_1071 4-hydroxy-2-oxovalerate aldolase; PFAM: HpcH/HpaI aldolase; PRIAM: 2-dehydro-3-deoxyglucarate aldolase; SPTR: 4-hydroxy-2-oxovalerate aldolase; IMG reference gene:2504771647; PFAM: HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.843
AEE53436.1
COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: bbr:BB0740 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; PRIAM: 4-hydroxy-2-oxovalerate aldolase; SPTR: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; IMG reference gene:2504775010; PFAM: HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.723
AEE50156.1
2-hydroxy-3-oxopropionate reductase; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115; KEGG: dfe:Dfer_1409 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; PRIAM: 2-hydroxy-3-oxopropionate reductase; SPTR: 2-hydroxy-3-oxopropionate reductase; IMG reference gene:2504771645; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase.
 
    0.702
AEE50157.1
COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: sli:Slin_1070 gluconate transporter; PFAM: Gluconate transporter; SPTR: Gluconate transporter; IMG reference gene:2504771646; PFAM: GntP family permease; TIGRFAM: gluconate transporter.
 
     0.560
AEE49205.1
Dihydrodipicolinate reductase; InterPro IPR000846; KEGG: pol:Bpro_0087 hypothetical protein; PFAM: Dihydrodipicolinate reductase; SPTR: Putative uncharacterized protein; IMG reference gene:2504770671; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase.
  
     0.551
AEE49206.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: pjd:Pjdr2_3667 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; IMG reference gene:2504770672; PFAM: Xylose isomerase-like TIM barrel.
  
     0.482
AEE51486.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
    0.466
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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