Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50181.1InterPro IPR019587; KEGG: hoh:Hoch_1265 polyketide cyclase/dehydrase; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein; IMG reference gene:2504771670; PFAM: Polyketide cyclase / dehydrase and lipid transport. (155 aa)    
Predicted Functional Partners:
AEE52297.1
InterPro IPR019587; KEGG: polyketide cyclase/dehydrase; PFAM: Polyketide cyclase/dehydrase; SPTR: Polyketide cyclase/dehydrase; IMG reference gene:2504773843; PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.755
AEE50182.1
KEGG: pjd:Pjdr2_0232 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771671.
       0.701
AEE50183.1
KEGG: srm:SRM_00661 conserved hypothetical protein, membrane; SPTR: Putative uncharacterized protein; IMG reference gene:2504771672.
       0.645
AEE50180.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sde:Sde_0799 sigma-24 (FecI-like); PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504771669; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.558
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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