Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
AEE50247.1Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_5609 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; IMG reference gene:2504771739. (415 aa)    
Predicted Functional Partners:
AEE50246.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_2351 outer membrane protein-like protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane protein-like protein; IMG reference gene:2504771738; PFAM: Outer membrane efflux protein.
 
 
 0.944
AEE50244.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sli:Slin_2349 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2504771736; PFAM: Predicted permease.
 
   0.863
AEE50243.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sli:Slin_2348 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2504771735; PFAM: Predicted permease.
 
   0.827
AEE51520.1
COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003660:IPR000014:IPR003594; KEGG: sli:Slin_2346 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; SMART: ATP-binding region, ATPase-like; PAS; HAMP linker domain; SPTR: PAS/PAC sensor signal transduction histidine kinase; IMG reference gene:2504773049; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.807
AEE50245.1
Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dfe:Dfer_5611 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2504771737; PFAM: ABC transporter.
 
 
 0.768
AEE50313.1
Heavy metal efflux pump, CzcA family; COGs: COG3696 Putative silver efflux pump; InterPro IPR004763:IPR001036; KEGG: chu:CHU_1512 cation efflux protein; PFAM: Acriflavin resistance protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; IMG reference gene:2504771808; PFAM: Outer membrane efflux protein; AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.673
AEE50703.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_3119 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein; IMG reference gene:2504772210; PFAM: Outer membrane efflux protein.
 
 
 0.630
AEE51774.1
InterPro IPR003838; KEGG: sli:Slin_3774 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2504773310; PFAM: Predicted permease.
 
 
 0.528
AEE51754.1
InterPro IPR003838; KEGG: sli:Slin_0931 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; IMG reference gene:2504773288; PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease.
 
 
 0.526
AEE53601.1
KEGG: sli:Slin_6050 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775176.
  
     0.502
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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