Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50249.1COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: mar:MAE_40120 PilT-like protein; PFAM: PilT protein, N-terminal; SPTR: PilT-like protein; IMG reference gene:2504771741; PFAM: PIN domain. (135 aa)    
Predicted Functional Partners:
AEE50248.1
Hypothetical protein; IMG reference gene:2504771740.
       0.773
AEE50250.1
KEGG: ddr:Deide_18401 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771742.
       0.686
vapC-4
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.682
AEE51951.1
Protein of unknown function DUF497; COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: cyt:cce_4948 hypothetical protein; PFAM: Protein of unknown function DUF497; SPTR: Putative uncharacterized protein; IMG reference gene:2504773491; PFAM: Protein of unknown function (DUF497).
  
   
 0.605
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.602
AEE50347.1
Hypothetical protein; COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: mar:MAE_04270 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771843; PFAM: Domain of unknown function (DUF3368).
  
     0.566
AEE49779.1
Protein of unknown function DUF2191; InterPro IPR019239; KEGG: maq:Maqu_2253 hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: Putative uncharacterized protein; IMG reference gene:2504771255; PFAM: Uncharacterized protein conserved in bacteria (DUF2191).
 
   0.529
AEE50246.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_2351 outer membrane protein-like protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane protein-like protein; IMG reference gene:2504771738; PFAM: Outer membrane efflux protein.
       0.472
AEE50247.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_5609 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; IMG reference gene:2504771739.
       0.472
AEE53648.1
Protein of unknown function DUF820; COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyj:Cyan7822_0791 hypothetical protein; PFAM: Protein of unknown function DUF820; SPTR: Putative uncharacterized protein; IMG reference gene:2504775223; PFAM: Protein of unknown function (DUF820).
  
     0.461
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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