STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE50340.1COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_1830 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Lipopolysaccharide biosynthesis glycosyltransferase; IMG reference gene:2504771836; PFAM: Glycosyl transferase family 2. (253 aa)    
Predicted Functional Partners:
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
   
 0.534
AEE52110.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: chu:CHU_1044 b-glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: B-glycosyltransferase, glycosyltransferase family 2 protein; IMG reference gene:2504773652; PFAM: Glycosyl transferase family 2.
  
 0.526
AEE50338.1
Aldehyde dehydrogenase (pyrroloquinoline-quinone); COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274; KEGG: sli:Slin_1104 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; PRIAM: Aldehyde dehydrogenase (pyrroloquinoline-quinone); SPTR: Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; IMG reference gene:2504771834; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; TIGRFAM: Tat (twin-argi [...]
       0.525
AEE50339.1
Isoquinoline 1-oxidoreductase; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: dfe:Dfer_3446 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; PRIAM: Isoquinoline 1-oxidoreductase; SPTR: (2Fe-2S)-binding domain protein; IMG reference gene:2504771835; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
       0.525
AEE49209.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: chu:CHU_1927 sugar transferase; PFAM: Bacterial sugar transferase; SPTR: Bacterial sugar transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; IMG reference gene:2504770675; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.522
AEE49590.1
COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: dfe:Dfer_2622 glycosyl transferase family 9; PFAM: Glycosyl transferase, family 9; SPTR: Glycosyl transferase family 9; IMG reference gene:2504771062; PFAM: Glycosyltransferase family 9 (heptosyltransferase).
 
  
 0.452
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
  
    0.402
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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