Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE50373.1Helix-turn-helix domain protein; COGs: COG2856 Zn peptidase; InterPro IPR001387:IPR010359; KEGG: gur:Gura_4039 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; Protein of unknown function DUF955; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; IMG reference gene:2504771869; PFAM: Helix-turn-helix; Domain of unknown function (DUF955). (352 aa)    
Predicted Functional Partners:
AEE50374.1
KEGG: kol:Kole_0648 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771870.
 
    0.949
AEE50375.1
Carbohydrate-binding CenC domain protein; InterPro IPR003305; KEGG: sli:Slin_3752 hypothetical protein; PFAM: Carbohydrate-binding, CenC-like; SPTR: Putative uncharacterized protein; IMG reference gene:2504771871; PFAM: Carbohydrate binding domain.
       0.498
AEE50372.1
InterPro IPR000182; KEGG: fbl:Fbal_3737 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, gnat family; IMG reference gene:2504771868; PFAM: Acetyltransferase (GNAT) family.
  
    0.492
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.