Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50479.1WD40-like beta Propeller containing protein; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: phe:Phep_1914 WD40 domain protein beta propeller; PFAM: WD40-like Beta Propeller; SPTR: WD40 domain protein beta Propeller; IMG reference gene:2504771981; PFAM: WD40-like Beta Propeller Repeat. (1022 aa)    
Predicted Functional Partners:
AEE48694.1
KEGG: lby:Lbys_2206 thrombospondin type 3 repeat-containing protein; SPTR: Thrombospondin type 3 repeat-containing protein; IMG reference gene:2504770147.
  
 
 0.842
AEE53529.1
InterPro IPR019734:IPR001440; KEGG: cpi:Cpin_2327 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat-containing protein; IMG reference gene:2504775104.
  
 
 0.695
AEE50595.1
Outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: phe:Phep_1145 outer membrane assembly lipoprotein YfiO; SPTR: Outer membrane assembly lipoprotein YfiO; TIGRFAM: Outer membrane assembly lipoprotein YfiO; IMG reference gene:2504772098; TIGRFAM: outer membrane assembly lipoprotein YfiO.
 
 
 0.658
AEE49579.1
Metallophosphoesterase; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391:IPR004843:IPR002372; KEGG: phe:Phep_1593 metallophosphoesterase; PFAM: Metallophosphoesterase; Pyrrolo-quinoline quinone repeat; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Metallophosphoesterase; IMG reference gene:2504771051; PFAM: Calcineurin-like phosphoesterase; PQQ enzyme repeat.
  
 
 0.611
lpxC
(3R)-hydroxymyristoyl-(acyl-carrier- protein)dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
  
 0.602
AEE48183.1
Peptidase M50; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478:IPR008915; KEGG: cpi:Cpin_2050 peptidase M50; PFAM: Peptidase M50; SPTR: Peptidase M50; IMG reference gene:2504769624; PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP.
  
  
 0.586
AEE48089.1
KEGG: chu:CHU_2243 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504769528; TIGRFAM: conserved repeat domain.
  
 
 0.581
AEE53517.1
KEGG: rmr:Rmar_2561 hypothetical protein; SPTR: Putative lipoprotein; IMG reference gene:2504775092.
  
 
 0.581
AEE52484.1
KEGG: mtt:Ftrac_2134 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774040.
  
 
 0.578
AEE49824.1
COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR013229:IPR012910:IPR000531; KEGG: mtt:Ftrac_3629 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; PEGA; SPTR: Putative exported TonB-dependent receptor protein; IMG reference gene:2504771300; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; PEGA domain.
  
     0.570
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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