Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50635.1KEGG: nhl:Nhal_2068 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772138; PFAM: Protoglobin. (194 aa)    
Predicted Functional Partners:
AEE50636.1
InterPro IPR018592; KEGG: cpi:Cpin_5105 hypothetical protein; PFAM: Domain of unknown function DUF2024; SPTR: Putative uncharacterized protein; IMG reference gene:2504772139; PFAM: Domain of unknown function (DUF2024).
 
     0.669
AEE50637.1
Regulatory protein MarR; InterPro IPR000835; KEGG: cpi:Cpin_5106 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator; IMG reference gene:2504772140; PFAM: MarR family.
 
     0.660
AEE48387.1
CRISPR-associated helicase Cas3; COGs: COG1203 helicase; InterProIPR006483:IPR006474:IPR011545:IPR001650:IPR 014001; KEGG: mba:Mbar_A0309 hypothetical protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: Dead/deah box helicase, fused to N-terminal hd domain; TIGRFAM: Helicase Cas3, CRISPR-associated, core; CRISPR-associated HD domain; IMG reference gene:2504769833; PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD.
  
     0.485
AEE50634.1
Hypothetical protein; IMG reference gene:2504772137.
       0.469
AEE48386.1
CRISPR-associated protein Cas5 family; COGs: COG1688 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013337:IPR013422; KEGG: mba:Mbar_A0308 hypothetical protein; SPTR: CRISPR-associated protein Cas5, Tneap subtype; TIGRFAM: CRISPR-associated protein Cas5, Tneap type; CRISPR-associated protein Cas5; IMG reference gene:2504769832; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/TNEAP; CRISPR-associated protein Cas5, N-terminal domain.
  
     0.463
AEE48385.1
CRISPR-associated autoregulator, DevR family; COGs: COG1857 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR010154:IPR013414; KEGG: msi:Msm_0168 putative DNA repair protein; SPTR: Crispr-associated regulatory protein, devr family; TIGRFAM: CRISPR-associated regulatory DevR; CRISPR-associated negative autoregulator; IMG reference gene:2504769831; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP.
  
     0.452
AEE52865.1
Regulatory protein MarR; InterPro IPR000835; KEGG: fjo:Fjoh_4139 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; IMG reference gene:2504774437; PFAM: MarR family.
 
     0.445
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.410
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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