Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEE50681.1 | AEE50682.1 | Halhy_2815 | Halhy_2816 | Protein of unknown function DUF1361; COGs: COG4330 membrane protein; InterPro IPR009793; KEGG: tde:TDE2227 hypothetical protein; PFAM: Protein of unknown function DUF1361; SPTR: Putative uncharacterized protein; IMG reference gene:2504772187; PFAM: Protein of unknown function (DUF1361). | Hypothetical protein; IMG reference gene:2504772188. | 0.535 |
AEE50681.1 | AEE50683.1 | Halhy_2815 | Halhy_2817 | Protein of unknown function DUF1361; COGs: COG4330 membrane protein; InterPro IPR009793; KEGG: tde:TDE2227 hypothetical protein; PFAM: Protein of unknown function DUF1361; SPTR: Putative uncharacterized protein; IMG reference gene:2504772187; PFAM: Protein of unknown function (DUF1361). | KEGG: sew:SeSA_A3353 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772189. | 0.495 |
AEE50682.1 | AEE50681.1 | Halhy_2816 | Halhy_2815 | Hypothetical protein; IMG reference gene:2504772188. | Protein of unknown function DUF1361; COGs: COG4330 membrane protein; InterPro IPR009793; KEGG: tde:TDE2227 hypothetical protein; PFAM: Protein of unknown function DUF1361; SPTR: Putative uncharacterized protein; IMG reference gene:2504772187; PFAM: Protein of unknown function (DUF1361). | 0.535 |
AEE50682.1 | AEE50683.1 | Halhy_2816 | Halhy_2817 | Hypothetical protein; IMG reference gene:2504772188. | KEGG: sew:SeSA_A3353 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772189. | 0.709 |
AEE50683.1 | AEE50681.1 | Halhy_2817 | Halhy_2815 | KEGG: sew:SeSA_A3353 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772189. | Protein of unknown function DUF1361; COGs: COG4330 membrane protein; InterPro IPR009793; KEGG: tde:TDE2227 hypothetical protein; PFAM: Protein of unknown function DUF1361; SPTR: Putative uncharacterized protein; IMG reference gene:2504772187; PFAM: Protein of unknown function (DUF1361). | 0.495 |
AEE50683.1 | AEE50682.1 | Halhy_2817 | Halhy_2816 | KEGG: sew:SeSA_A3353 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772189. | Hypothetical protein; IMG reference gene:2504772188. | 0.709 |