Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE50710.1KEGG: phe:Phep_0729 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772218. (441 aa)    
Predicted Functional Partners:
AEE50709.1
KEGG: bth:BT_3111 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772217.
 
     0.872
AEE49818.1
KEGG: cpi:Cpin_0316 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504771294.
 
     0.795
AEE50711.1
KEGG: cpi:Cpin_6894 TPR repeat-containing protein; SPTR: TPR repeat-containing protein; IMG reference gene:2504772219.
       0.655
AEE53869.1
KEGG: sli:Slin_5342 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504775448.
  
     0.524
AEE48298.1
Regulatory protein MarR; InterPro IPR000835; KEGG: phe:Phep_2094 regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; IMG reference gene:2504769742.
  
     0.498
AEE53930.1
RNA-directed DNA polymerase; InterPro IPR000477; KEGG: lpf:lpl1015 hypothetical protein; PFAM: RNA-directed DNA polymerase (reverse transcriptase); PRIAM: RNA-directed DNA polymerase; SPTR: RNA-directed DNA polymerase (Reverse transcriptase); IMG reference gene:2504775510; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.442
AEE48307.1
Regulatory protein MarR; InterPro IPR000835; KEGG: sli:Slin_2146 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; IMG reference gene:2504769751.
 
     0.408
AEE49179.1
Hypothetical protein; KEGG: tva:TVAG_087170 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein, putative; IMG reference gene:2504770645.
  
     0.405
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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