Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEE50766.1Integrase catalytic region; InterPro IPR001584; KEGG: sli:Slin_6760 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Integrase catalytic region; IMG reference gene:2504772275; PFAM: Integrase core domain. (311 aa)    
Predicted Functional Partners:
AEE50767.1
Hypothetical protein; KEGG: pfo:Pfl01_2130 ISPsy11, transposase OrfA; SPTR: Transposase; IMG reference gene:2504772276.
       0.773
AEE50768.1
InterPro IPR012912; KEGG: mgm:Mmc1_2928 plasmid pRiA4b ORF-3 family protein; PFAM: Plasmid pRiA4b ORF-3-like; SPTR: Probable transposase; IMG reference gene:2504772277; PFAM: Plasmid pRiA4b ORF-3-like protein.
 
     0.611
AEE50765.1
Hypothetical protein; IMG reference gene:2504772274.
       0.601
AEE51358.1
Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: bfr:BF1774 IS110 family transposase; PFAM: Transposase, IS116/IS110/IS902; SPTR: Family transposase, putative; IMG reference gene:2504772884; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
 
  
 0.508
AEE52489.1
Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; SPTR: Family transposase, putative; IMG reference gene:2504774045; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
 
  
 0.480
AEE49660.1
Transposase IS3/IS911 family protein; InterPro IPR002514; KEGG: lpn:lpg2565 transposase ORF-A, IS-type; PFAM: Transposase IS3/IS911; SPTR: Transposase ORF-A, IS-type; IMG reference gene:2504771133; PFAM: Transposase.
  
     0.479
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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