Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50908.1Peptidase U61 LD-carboxypeptidase A; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: sjp:SJA_C1-08360 homolog of microcin C7 resistance protein MccF; PFAM: Peptidase S66, LD-carboxypeptidase A; SPTR: Homolog of microcin C7 resistance protein MccF; IMG reference gene:2504772424; PFAM: LD-carboxypeptidase. (346 aa)    
Predicted Functional Partners:
AEE51964.1
COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: sli:Slin_0459 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Putative uncharacterized protein; IMG reference gene:2504773504; PFAM: Protein of unknown function (DUF1343).
  
     0.587
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
   
 0.552
AEE50909.1
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: vfm:VFMJ11_1834 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Acyl-CoA synthase; IMG reference gene:2504772425; PFAM: AMP-binding enzyme.
       0.546
AEE51409.1
Penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR017790:IPR005311:IPR001460; KEGG: aas:Aasi_0246 hypothetical protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 2; TIGRFAM: Penicillin-binding protein 2; IMG reference gene:2504772935; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.
    
 0.521
AEE50907.1
Abortive infection protein; InterPro IPR003675; KEGG: btl:BALH_0989 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease family protein; IMG reference gene:2504772423; PFAM: CAAX amino terminal protease family.
       0.517
AEE50910.1
Hypothetical protein; IMG reference gene:2504772426.
       0.517
AEE53287.1
COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: dfe:Dfer_4819 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Putative uncharacterized protein; IMG reference gene:2504774860; PFAM: Protein of unknown function (DUF1343).
  
     0.499
AEE48511.1
Chloromuconate cycloisomerase; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: sli:Slin_1934 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; PRIAM: Chloromuconate cycloisomerase; SPTR: Mandelate racemase/muconate lactonizing protein; IMG reference gene:2504769958; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain.
 
    0.437
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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