Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEE50952.1InterPro IPR008910; KEGG: sli:Slin_4747 TM helix repeat-containing protein; PFAM: Conserved TM helix; SPTR: Conserved TM helix repeat-containing protein; IMG reference gene:2504772469; PFAM: Mechanosensitive ion channel; Conserved TM helix. (283 aa)    
Predicted Functional Partners:
AEE50954.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_4745 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2504772471; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
 
     0.810
AEE50953.1
Hypothetical protein; IMG reference gene:2504772470.
       0.682
AEE50951.1
KEGG: cpi:Cpin_0385 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504772468; PFAM: Protein of unknown function (DUF3078).
       0.586
AEE48763.1
Peptidase M43B pregnancy-associated plasma-A; InterPro IPR008754; KEGG: sli:Slin_5064 conserved repeat domain protein; PFAM: Peptidase M43B, pregnancy-associated plasma-A; SPTR: Conserved repeat domain protein; IMG reference gene:2504770218.
  
     0.504
AEE50955.1
Hypothetical protein; KEGG: mtt:Ftrac_1592 spheroidene monooxygenase; SPTR: Spheroidene monooxygenase; IMG reference gene:2504772472.
       0.440
AEE52481.1
KEGG: fps:FP1823 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504774037.
  
     0.406
Your Current Organism:
Haliscomenobacter hydrossis
NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100
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