AEE50963.1 protein (Haliscomenobacter hydrossis)

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AEE50963.1

ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family. (559 aa)

Predicted Functional Partners:

rplD

0.630

rpmB

0.626

rplU

0.624

rpsC

0.614

rpsO

0.612

rplT

0.610

rpmD

0.609

rpsG

0.608

rplC

0.608

rpmH

0.604

Your Current Organism:

Haliscomenobacter hydrossis

NCBI taxonomy Id: 760192
Other names: H. hydrossis DSM 1100, Haliscomenobacter hydrossis DSM 1100

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEE50963.1	rplC	Halhy_3100	Halhy_4742	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.608
AEE50963.1	rplD	Halhy_3100	Halhy_4743	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel.	0.630
AEE50963.1	rplT	Halhy_3100	Halhy_5157	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.610
AEE50963.1	rplU	Halhy_3100	Halhy_1511	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.624
AEE50963.1	rpmB	Halhy_3100	Halhy_4817	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: mtt:Ftrac_2018 LSU ribosomal protein l28p; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28 Rpl28; TIGRFAM: Ribosomal protein L28; IMG reference gene:2504774210; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.626
AEE50963.1	rpmD	Halhy_3100	Halhy_4760	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	Ribosomal protein L30; InterPro IPR005996:IPR000517; KEGG: coc:Coch_1165 ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e, conserved region; SPTR: 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; IMG reference gene:2504774152; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle.	0.609
AEE50963.1	rpmH	Halhy_3100	Halhy_4029	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	HAMAP: 50S ribosomal protein L34; InterPro IPR000271; KEGG: mtt:Ftrac_1678 LSU ribosomal protein l34p; PFAM: Ribosomal protein L34; SPTR: LSU ribosomal protein L34P; TIGRFAM: Ribosomal protein L34; IMG reference gene:2504773414; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.	0.604
AEE50963.1	rpsC	Halhy_3100	Halhy_4748	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.614
AEE50963.1	rpsG	Halhy_3100	Halhy_4739	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.608
AEE50963.1	rpsO	Halhy_3100	Halhy_5547	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.612
rplC	AEE50963.1	Halhy_4742	Halhy_3100	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: phe:Phep_1117 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: ATP-binding cassette protein, ChvD family; IMG reference gene:2504772480; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family.	0.608
rplC	rplD	Halhy_4742	Halhy_4743	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplT	Halhy_4742	Halhy_5157	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.994
rplC	rplU	Halhy_4742	Halhy_1511	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.989
rplC	rpmB	Halhy_4742	Halhy_4817	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: mtt:Ftrac_2018 LSU ribosomal protein l28p; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28 Rpl28; TIGRFAM: Ribosomal protein L28; IMG reference gene:2504774210; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.988
rplC	rpmD	Halhy_4742	Halhy_4760	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L30; InterPro IPR005996:IPR000517; KEGG: coc:Coch_1165 ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e, conserved region; SPTR: 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; IMG reference gene:2504774152; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle.	0.995
rplC	rpmH	Halhy_4742	Halhy_4029	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	HAMAP: 50S ribosomal protein L34; InterPro IPR000271; KEGG: mtt:Ftrac_1678 LSU ribosomal protein l34p; PFAM: Ribosomal protein L34; SPTR: LSU ribosomal protein L34P; TIGRFAM: Ribosomal protein L34; IMG reference gene:2504773414; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; Belongs to the bacterial ribosomal protein bL34 family.	0.943
rplC	rpsC	Halhy_4742	Halhy_4748	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.996
rplC	rpsG	Halhy_4742	Halhy_4739	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.996
rplC	rpsO	Halhy_4742	Halhy_5547	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.988

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